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cd22a76c78
* correct md5sum for updated star/samtools * merge changes in align test.yml * update md5sum for star genomegenerate * update md5sum for star align
60 lines
2.6 KiB
YAML
60 lines
2.6 KiB
YAML
- name: star genomegenerate test_star_genomegenerate
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command: nextflow run ./tests/modules/star/genomegenerate -entry test_star_genomegenerate -c ./tests/config/nextflow.config -c ./tests/modules/star/genomegenerate/nextflow.config
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tags:
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- star
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- star/genomegenerate
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files:
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- path: output/star/star/Genome
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md5sum: a654229fbca6071dcb6b01ce7df704da
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- path: output/star/star/Log.out
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- path: output/star/star/SA
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md5sum: 8c3edc46697b72c9e92440d4cf43506c
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- path: output/star/star/SAindex
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md5sum: d0fbf2789ee1e9f60c352ba3655d9de4
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- path: output/star/star/chrLength.txt
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md5sum: c81f40f27e72606d7d07097c1d56a5b5
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- path: output/star/star/chrName.txt
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md5sum: 5ae68a67b70976ee95342a7451cb5af1
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- path: output/star/star/chrNameLength.txt
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md5sum: b190587cae0531f3cf25552d8aa674db
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- path: output/star/star/chrStart.txt
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md5sum: 8d3291e6bcdbe9902fbd7c887494173f
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- path: output/star/star/exonGeTrInfo.tab
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md5sum: d04497f69d6ef889efd4d34fe63edcc4
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- path: output/star/star/exonInfo.tab
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md5sum: 0d560290fab688b7268d88d5494bf9fe
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- path: output/star/star/geneInfo.tab
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md5sum: 8b608537307443ffaee4927d2b428805
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- path: output/star/star/genomeParameters.txt
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md5sum: 5a1ec027e575c3d7c1851e6b80fb8c5d
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- path: output/star/star/sjdbInfo.txt
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md5sum: 5690ea9d9f09f7ff85b7fd47bd234903
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- path: output/star/star/sjdbList.fromGTF.out.tab
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md5sum: 8760c33e966dad0b39f440301ebbdee4
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- path: output/star/star/sjdbList.out.tab
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md5sum: 9e4f991abbbfeb3935a2bb21b9e258f1
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- path: output/star/star/transcriptInfo.tab
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md5sum: 0c3a5adb49d15e5feff81db8e29f2e36
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- name: star genomegenerate test_star_genomegenerate stub
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command: nextflow run ./tests/modules/star/genomegenerate -entry test_star_genomegenerate -c ./tests/config/nextflow.config -c ./tests/modules/star/genomegenerate/nextflow.config -stub-run
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tags:
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- star
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- star/genomegenerate
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files:
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- path: output/star/star/Genome
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- path: output/star/star/Log.out
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- path: output/star/star/SA
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- path: output/star/star/SAindex
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- path: output/star/star/chrLength.txt
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- path: output/star/star/chrName.txt
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- path: output/star/star/chrNameLength.txt
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- path: output/star/star/chrStart.txt
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- path: output/star/star/exonGeTrInfo.tab
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- path: output/star/star/exonInfo.tab
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- path: output/star/star/geneInfo.tab
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- path: output/star/star/genomeParameters.txt
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- path: output/star/star/sjdbInfo.txt
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- path: output/star/star/sjdbList.fromGTF.out.tab
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- path: output/star/star/sjdbList.out.tab
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- path: output/star/star/transcriptInfo.tab
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