nf-core_modules/modules/bedtools/merge/meta.yml

38 lines
1.2 KiB
YAML

name: bedtools_merge
description: combines overlapping or “book-ended” features in an interval file into a single feature which spans all of the combined features.
keywords:
- bed
- merge
tools:
- bedtools:
description: |
A set of tools for genomic analysis tasks, specifically enabling genome arithmetic (merge, count, complement) on various file types.
documentation: https://bedtools.readthedocs.io/en/latest/content/tools/merge.html
input:
- meta:
type: map
description: |
Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]
- bed:
type: file
description: Input BED file
pattern: "*.{bed}"
output:
- meta:
type: map
description: |
Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]
- bed:
type: file
description: Overlapped bed file with combined features
pattern: "*.{bed}"
- versions:
type: file
description: File containing software versions
pattern: "versions.yml"
authors:
- "@Emiller88"
- "@sruthipsuresh"
- "@drpatelh"