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37 lines
994 B
YAML
37 lines
994 B
YAML
name: homer_findpeaks
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description: Find peaks with HOMER suite
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keywords:
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- annotations
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- peaks
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tools:
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- homer:
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description: |
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HOMER (Hypergeometric Optimization of Motif EnRichment) is a suite of tools for Motif Discovery and next-gen sequencing analysis.
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documentation: http://homer.ucsd.edu/homer/
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doi: 10.1016/j.molcel.2010.05.004.
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input:
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- meta:
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type: map
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description: |
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Groovy Map containing sample information
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e.g. [ id:'test', single_end:false ]
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- tagDir:
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type: directory
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description: "The 'Tag Directory'"
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pattern: "tagDir"
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output:
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- meta:
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type: map
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description: |
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Groovy Map containing sample information
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e.g. [ id:'test', single_end:false ]
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- peaks:
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type: file
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description: The found peaks
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pattern: "*peaks.txt"
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- versions:
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type: file
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description: File containing software versions
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pattern: "versions.yml"
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authors:
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- "@EMiller88"
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