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40 lines
1 KiB
YAML
40 lines
1 KiB
YAML
name: tabix_bgzip
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description: Compresses files
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keywords:
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- compress
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- bgzip
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- tabix
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tools:
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- bgzip:
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description: |
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Bgzip compresses files in a similar manner to, and compatible with, gzip.
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homepage: https://www.htslib.org/doc/tabix.html
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documentation: http://www.htslib.org/doc/bgzip.html
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doi: 10.1093/bioinformatics/btp352
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input:
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- meta:
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type: map
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description: |
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Groovy Map containing sample information
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e.g. [ id:'test', single_end:false ]
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- file:
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type: file
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description: text file
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output:
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- meta:
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type: map
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description: |
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Groovy Map containing sample information
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e.g. [ id:'test', single_end:false ]
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- file:
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type: file
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description: Output compressed file
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pattern: "*.{gz}"
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- versions:
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type: file
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description: File containing software versions
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pattern: "versions.yml"
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authors:
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- "@joseespinosa"
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- "@drpatelh"
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- "@maxulysse"
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