nf-core_modules/modules/multiqc/meta.yml
James A. Fellows Yates 4b1d4bf401
Update MULTIQC for an additional custom config (#2063)
* Update main.nf

* Update meta.yml

* Re-add logos as not staged in a way that works with MultiQC config files

* Add support for secondary custom configs
2022-09-15 13:53:15 +02:00

55 lines
1.6 KiB
YAML

name: MultiQC
description: Aggregate results from bioinformatics analyses across many samples into a single report
keywords:
- QC
- bioinformatics tools
- Beautiful stand-alone HTML report
tools:
- multiqc:
description: |
MultiQC searches a given directory for analysis logs and compiles a HTML report.
It's a general use tool, perfect for summarising the output from numerous bioinformatics tools.
homepage: https://multiqc.info/
documentation: https://multiqc.info/docs/
licence: ["GPL-3.0-or-later"]
input:
- multiqc_files:
type: file
description: |
List of reports / files recognised by MultiQC, for example the html and zip output of FastQC
- multiqc_config:
type: file
description: Optional config yml for MultiQC
pattern: "*.{yml,yaml}"
- extra_multiqc_config:
type: file
description: Second optional config yml for MultiQC. Will override common sections in multiqc_config.
pattern: "*.{yml,yaml}"
- multiqc_logo:
type: file
description: Optional logo file for MultiQC
pattern: "*.{png}"
output:
- report:
type: file
description: MultiQC report file
pattern: "multiqc_report.html"
- data:
type: dir
description: MultiQC data dir
pattern: "multiqc_data"
- plots:
type: file
description: Plots created by MultiQC
pattern: "*_data"
- versions:
type: file
description: File containing software versions
pattern: "versions.yml"
authors:
- "@abhi18av"
- "@bunop"
- "@drpatelh"
- "@jfy133"