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912f30e95a
* add software/pairtools * create a branch for pairtools/dedup * remove dedup from the filename.
13 lines
434 B
Text
13 lines
434 B
Text
#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { PAIRTOOLS_DEDUP } from '../../../../software/pairtools/dedup/main.nf' addParams( options: ['suffix':'.dedup'] )
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workflow test_pairtools_dedup {
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input = [ [ id:'test', single_end:false ], // meta map
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file("https://raw.githubusercontent.com/open2c/pairtools/master/tests/data/mock.4dedup.pairsam", checkIfExists: true) ]
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PAIRTOOLS_DEDUP ( input )
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}
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