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3aacd46da2
* backfilled modules with meta.yml that had no license identifier * harmonized BSD license names * whitespace linting at modules/unzip/meta.yml:12 * harmonized software from US NIH-NCBI/NIST to 'US-Government-Work' * Update modules/bcftools/index/meta.yml `bcftools` is dual-licensed, use associative array to allow for multiple licenses Co-authored-by: Michael L Heuer <heuermh@acm.org> Co-authored-by: Michael L Heuer <heuermh@acm.org>
39 lines
1.1 KiB
YAML
39 lines
1.1 KiB
YAML
name: seqkit_split2
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description: Split single or paired-end fastq.gz files
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keywords:
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- split
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- fastq
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tools:
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- seqkit:
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description: |
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Cross-platform and ultrafast toolkit for FASTA/Q file manipulation, written by Wei Shen.
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homepage: https://github.com/shenwei356/seqkit
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documentation: https://bioinf.shenwei.me/seqkit/
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doi: 10.1371/journal.pone.0163962
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licence: ['MIT']
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input:
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- meta:
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type: map
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description: |
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Groovy Map containing sample information
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e.g. [ id:'test', single_end:false ]
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- reads:
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type: file
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description: FastQ files
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pattern: "*.{fq.gz/fastq.gz}"
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output:
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- meta:
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type: map
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description: |
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Groovy Map containing sample information
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e.g. [ id:'test', single_end:false ]
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- reads:
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type: file
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description: Split fastq files
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pattern: "*.{fq.gz/fastq.gz}"
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- versions:
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type: file
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description: File containing software versions
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pattern: "versions.yml"
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authors:
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- "@FriederikeHanssen"
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