nf-core_modules/tests/modules/bcftools/concat/test.yml at 4f0b02b7b54fab6164164b9067e2fc70460f0b8f - millironx/nf-core_modules - Milliron X Code: Code hosting for cattle or technology, but especially anything to do with both of them

millironx/nf-core_modules

mirror of https://github.com/MillironX/nf-core_modules.git synced 2024-11-11 12:43:09 +00:00

Abhinav Sharma 67cc3bd116

Add bcftools/concat module. (#641 )

* draft for bcftools modules [ci skip]

* initial test for bcftools concat

* Update the params for testing

* fix tests

* Accomodate code review [ci skip]

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>

* Update the meta file and open PR for review

* Update the keyword

* Update the tags for module [ci skip[

* add threads

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>

2021-08-10 15:10:27 +02:00

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YAML

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 - name: bcftools concat test_bcftools_concat
   command: nextflow run tests/modules/bcftools/concat -entry test_bcftools_concat -c tests/config/nextflow.config
   tags:
     - bcftools/concat
     - bcftools
   files:
     - path: output/bcftools/test3.vcf.gz
       md5sum: c400c7458524d889e0967b06ed72534f