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e937c7950a
* Update README * Rename pytest_software.yml to pytest_modules.yml * Rename main software directory to modules * Remove deprecated modules * Rename tests software to modules * Replace paths for tests in pytest_modules.yml * Replace software with modules in Github Actions * Replace software with modules in main.nf tests * Rename software to modules in test.yml
16 lines
528 B
YAML
16 lines
528 B
YAML
- name: Run bwameth single-end test workflow
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command: nextflow run ./tests/modules/bwameth/align -entry test_bwameth_align_single_end -c tests/config/nextflow.config
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tags:
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- bwameth
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- bwameth/align
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files:
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- path: output/test_single_end/test.bam
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- name: Run bwameth paired-end test workflow
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command: nextflow run ./tests/modules/bwameth/align -entry test_bwameth_align_paired_end -c tests/config/nextflow.config
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tags:
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- bwameth
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- bwameth/align
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files:
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- path: output/test_paired_end/test.bam
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