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9764eef361
* Update eido/validate module * Update modules/eido/convert/meta.yml Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
24 lines
792 B
Text
24 lines
792 B
Text
#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { EIDO_CONVERT } from '../../../../modules/eido/convert/main.nf'
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workflow test_eido_convert_nextflow_samplesheet {
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nextflow_samplesheet = file("https://raw.githubusercontent.com/nf-core/test-datasets/modules/data/delete_me/pep/test_nextflow_original_samplesheet.csv", checkIfExists: true)
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format = "csv"
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pep_input_base_dir = []
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EIDO_CONVERT ( nextflow_samplesheet, format, pep_input_base_dir )
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}
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workflow test_eido_convert_pep_project {
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pep_project = file("https://raw.githubusercontent.com/nf-core/test-datasets/modules/data/delete_me/pep/test_pep_format_files/config.yaml", checkIfExists: true)
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format = "csv"
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pep_input_base_dir = []
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EIDO_CONVERT ( pep_project, format, pep_input_base_dir )
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}
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