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74b569b66a
* Created epang module from template * Module seems to be working * Namechange to epang_place * Move model to meta map * Fix linting problems * Prettier * Forgot --threads! * Moved module to epang * Move reference file params * Directory output * Make all args optional * Added inputs for three other types of file arguments * Update modules/epang/main.nf Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Add directory to output doc, reorder the other * Make model specification less hardcoded Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
22 lines
661 B
Text
22 lines
661 B
Text
#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { EPANG } from '../../../modules/epang/main.nf'
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workflow test_epang {
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input = [
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[ id:'test', model:'LG' ], // meta map
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file('https://github.com/nf-core/test-datasets/raw/modules/data/delete_me/epang/query.alnfaa.gz', checkIfExists: true)
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]
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EPANG (
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input,
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file('https://github.com/nf-core/test-datasets/raw/modules/data/delete_me/epang/reference.alnfaa.gz', checkIfExists: true),
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file('https://github.com/nf-core/test-datasets/raw/modules/data/delete_me/epang/reference.newick', checkIfExists: true),
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[],
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[],
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[]
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)
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}
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