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nf-core_modules/tests/modules/gatk4/variantrecalibrator
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nickhsmith edfe28a5e0
Variant recalibration (#1885) 
* update tests

* update

* update

* make the manta inputs consistant for germline/somatic/tumoronly

* match chromosomes to cram file (chr21)

* undo genotypegvfs

* undo genotypegvfs

* update VariantRecalibrator

* lint

* add '--resource:' tag

Co-authored-by: Smith Nicholas <smith@in.tum.de>
Co-authored-by: FriederikeHanssen <Friederike.hanssen@qbic.uni-tuebingen.de>
2022-07-15 09:21:34 +02:00
..
main.nf Variant recalibration (#1885) 2022-07-15 09:21:34 +02:00
nextflow.config Variant recalibration (#1885) 2022-07-15 09:21:34 +02:00
test.yml Update md5sums 2022-05-12 16:07:12 +02:00