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f62e4cf5f0
* Added Somalier extract module * changed somalier_dbg4 to somalier for versions.yml * added and minor changes in meta.yml * Apply suggestions from code review * Update main.nf * Typo in quay.io rl * updated the input * new updates * linting * linting * changed the test.yml * Update modules/somalier/extract/main.nf Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Update modules/somalier/extract/main.nf Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Update modules/somalier/extract/meta.yml Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Update modules/somalier/extract/main.nf Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Update tests/modules/somalier/extract/main.nf Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Update modules/somalier/extract/main.nf Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Update tests/modules/somalier/extract/test.yml Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * last changes * Update modules/somalier/extract/meta.yml Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Update modules/somalier/extract/meta.yml Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Update modules/somalier/extract/main.nf Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
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122 B
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process {
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publishDir = { "${params.outdir}/${task.process.tokenize(':')[-1].tokenize('_')[0].toLowerCase()}" }
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} |