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f62e4cf5f0
* Added Somalier extract module * changed somalier_dbg4 to somalier for versions.yml * added and minor changes in meta.yml * Apply suggestions from code review * Update main.nf * Typo in quay.io rl * updated the input * new updates * linting * linting * changed the test.yml * Update modules/somalier/extract/main.nf Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Update modules/somalier/extract/main.nf Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Update modules/somalier/extract/meta.yml Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Update modules/somalier/extract/main.nf Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Update tests/modules/somalier/extract/main.nf Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Update modules/somalier/extract/main.nf Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Update tests/modules/somalier/extract/test.yml Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * last changes * Update modules/somalier/extract/meta.yml Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Update modules/somalier/extract/meta.yml Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Update modules/somalier/extract/main.nf Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
8 lines
373 B
YAML
8 lines
373 B
YAML
- name: somalier extract test_somalier_extract
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command: nextflow run ./tests/modules/somalier/extract/main.nf -c ./tests/config/nextflow.config -c ./tests/modules/somalier/extract/nextflow.config -entry test_somalier_extract
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tags:
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- somalier/extract
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- somalier
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files:
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- path: output/somalier/normal.somalier
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md5sum: 21f0b980edd42ddaa8ab964959c1de02
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