Maxime U. Garcia 3b600af50e feat: update gatk4 from 4.2.0.0 to 4.2.3.0 (#1059) ... * feat: update gatk4 from 4.2.0.0 to 4.2.3.0 * update md5checksum * commit all files * actually checksum was good, but I suspect something fishy with the tests		2021-11-11 08:58:59 +01:00
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applybqsr	feat: update gatk4 from 4.2.0.0 to 4.2.3.0 (#1059)	2021-11-11 08:58:59 +01:00
baserecalibrator	feat: update gatk4 from 4.2.0.0 to 4.2.3.0 (#1059)	2021-11-11 08:58:59 +01:00
bedtointervallist	feat: update gatk4 from 4.2.0.0 to 4.2.3.0 (#1059)	2021-11-11 08:58:59 +01:00
calculatecontamination	feat: update gatk4 from 4.2.0.0 to 4.2.3.0 (#1059)	2021-11-11 08:58:59 +01:00
createsequencedictionary	feat: update gatk4 from 4.2.0.0 to 4.2.3.0 (#1059)	2021-11-11 08:58:59 +01:00
createsomaticpanelofnormals	feat: update gatk4 from 4.2.0.0 to 4.2.3.0 (#1059)	2021-11-11 08:58:59 +01:00
estimatelibrarycomplexity	feat: update gatk4 from 4.2.0.0 to 4.2.3.0 (#1059)	2021-11-11 08:58:59 +01:00
fastqtosam	feat: update gatk4 from 4.2.0.0 to 4.2.3.0 (#1059)	2021-11-11 08:58:59 +01:00
filtermutectcalls	feat: update gatk4 from 4.2.0.0 to 4.2.3.0 (#1059)	2021-11-11 08:58:59 +01:00
genomicsdbimport	feat: update gatk4 from 4.2.0.0 to 4.2.3.0 (#1059)	2021-11-11 08:58:59 +01:00
getpileupsummaries	feat: update gatk4 from 4.2.0.0 to 4.2.3.0 (#1059)	2021-11-11 08:58:59 +01:00
haplotypecaller	feat: update gatk4 from 4.2.0.0 to 4.2.3.0 (#1059)	2021-11-11 08:58:59 +01:00
intervallisttools	feat: update gatk4 from 4.2.0.0 to 4.2.3.0 (#1059)	2021-11-11 08:58:59 +01:00
learnreadorientationmodel	feat: update gatk4 from 4.2.0.0 to 4.2.3.0 (#1059)	2021-11-11 08:58:59 +01:00
markduplicates	feat: update gatk4 from 4.2.0.0 to 4.2.3.0 (#1059)	2021-11-11 08:58:59 +01:00
mergebamalignment	feat: update gatk4 from 4.2.0.0 to 4.2.3.0 (#1059)	2021-11-11 08:58:59 +01:00
mergevcfs	feat: update gatk4 from 4.2.0.0 to 4.2.3.0 (#1059)	2021-11-11 08:58:59 +01:00
mutect2	feat: update gatk4 from 4.2.0.0 to 4.2.3.0 (#1059)	2021-11-11 08:58:59 +01:00
revertsam	feat: update gatk4 from 4.2.0.0 to 4.2.3.0 (#1059)	2021-11-11 08:58:59 +01:00
samtofastq	feat: update gatk4 from 4.2.0.0 to 4.2.3.0 (#1059)	2021-11-11 08:58:59 +01:00
splitncigarreads	feat: update gatk4 from 4.2.0.0 to 4.2.3.0 (#1059)	2021-11-11 08:58:59 +01:00
variantfiltration	feat: update gatk4 from 4.2.0.0 to 4.2.3.0 (#1059)	2021-11-11 08:58:59 +01:00