| .. |
|
applybqsr
|
feat: update gatk4 from 4.2.0.0 to 4.2.3.0 (#1059)
|
2021-11-11 08:58:59 +01:00 |
|
baserecalibrator
|
Update to allow cram + update needed to use the gatk4 modules in sarek (#976)
|
2021-10-29 13:01:05 +02:00 |
|
bedtointervallist
|
|
|
|
calculatecontamination
|
feat: update gatk4 from 4.2.0.0 to 4.2.3.0 (#1059)
|
2021-11-11 08:58:59 +01:00 |
|
createsequencedictionary
|
|
|
|
createsomaticpanelofnormals
|
feat: update gatk4 from 4.2.0.0 to 4.2.3.0 (#1059)
|
2021-11-11 08:58:59 +01:00 |
|
estimatelibrarycomplexity
|
|
|
|
fastqtosam
|
feat: update gatk4 from 4.2.0.0 to 4.2.3.0 (#1059)
|
2021-11-11 08:58:59 +01:00 |
|
filtermutectcalls
|
feat: fastaidx -> fai (#1073)
|
2021-11-15 18:03:02 +01:00 |
|
genomicsdbimport
|
bug fixes: genomicsdbimport (#1035)
|
2021-11-06 15:51:15 +00:00 |
|
genotypegvcfs
|
New modules added: issues #200 and #310 (#884)
|
2021-11-15 15:43:06 +00:00 |
|
getpileupsummaries
|
feat: _idx -> _tbi (#1074)
|
2021-11-15 17:49:20 +01:00 |
|
haplotypecaller
|
Update to allow cram + update needed to use the gatk4 modules in sarek (#976)
|
2021-10-29 13:01:05 +02:00 |
|
indexfeaturefile
|
New modules added: issues #200 and #310 (#884)
|
2021-11-15 15:43:06 +00:00 |
|
intervallisttools
|
|
|
|
learnreadorientationmodel
|
|
|
|
markduplicates
|
feat: update gatk4 from 4.2.0.0 to 4.2.3.0 (#1059)
|
2021-11-11 08:58:59 +01:00 |
|
mergebamalignment
|
feat: update gatk4 from 4.2.0.0 to 4.2.3.0 (#1059)
|
2021-11-11 08:58:59 +01:00 |
|
mergevcfs
|
feat: update gatk4 from 4.2.0.0 to 4.2.3.0 (#1059)
|
2021-11-11 08:58:59 +01:00 |
|
mutect2
|
feat: fastaidx -> fai (#1073)
|
2021-11-15 18:03:02 +01:00 |
|
revertsam
|
feat: update gatk4 from 4.2.0.0 to 4.2.3.0 (#1059)
|
2021-11-11 08:58:59 +01:00 |
|
samtofastq
|
|
|
|
splitncigarreads
|
feat: update gatk4 from 4.2.0.0 to 4.2.3.0 (#1059)
|
2021-11-11 08:58:59 +01:00 |
|
variantfiltration
|
|
|
