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940d7fe9d6
* Move MetaPhlAn3 to a subcommand and add mergemetaphlantables * Add mergemetaphlantables tests * Add mergemetaphlantables to test config * Apply suggestions from code review * Revert now unnecessary input channel name change and now document * Update modules/metaphlan3/mergemetaphlantables/main.nf * Require database directory and more details in description
9 lines
252 B
Text
9 lines
252 B
Text
process {
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publishDir = { "${params.outdir}/${task.process.tokenize(':')[-1].tokenize('_')[0].toLowerCase()}" }
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withName: METAPHLAN3 {
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ext.args = '--index mpa_v30_CHOCOPhlAn_201901 --add_viruses --bt2_ps very-sensitive-local'
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}
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}
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