mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-12-26 23:43:19 -05:00
21 lines
580 B
Text
21 lines
580 B
Text
#!/usr/bin/env nextflow
|
|
|
|
nextflow.enable.dsl = 2
|
|
|
|
include { SAMTOOLS_FAIDX } from '../../../../modules/samtools/faidx/main.nf'
|
|
|
|
workflow test_samtools_faidx {
|
|
|
|
input = [ [ id:'test', single_end:false ], // meta map
|
|
file(params.test_data['sarscov2']['genome']['genome_fasta'], checkIfExists: true) ]
|
|
|
|
SAMTOOLS_FAIDX ( input )
|
|
}
|
|
|
|
workflow test_samtools_faidx_bgzip {
|
|
|
|
input = [ [ id:'test', single_end:false ], // meta map
|
|
file(params.test_data['sarscov2']['genome']['genome_fasta_gz'], checkIfExists: true) ]
|
|
|
|
SAMTOOLS_FAIDX ( input )
|
|
}
|