mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-14 05:43:08 +00:00
26 lines
799 B
YAML
26 lines
799 B
YAML
name: bwa-mem2 index
|
|
description: create indexes for BWA from a fasta file
|
|
keywords:
|
|
- index
|
|
tools:
|
|
- bwa:
|
|
description: |
|
|
Bwa-mem2 is the next version of the bwa-mem algorithm in bwa.
|
|
It produces alignment identical to bwa and is ~1.3-3.1x faster depending on the use-case, dataset and the running machine.
|
|
homepage: https://github.com/bwa-mem2/bwa-mem2
|
|
documentation: https://github.com/bwa-mem2/bwa-mem2
|
|
arxiv: arXiv:1303.3997
|
|
input:
|
|
-
|
|
- input:
|
|
type: file
|
|
description: Input fasta file
|
|
pattern: *.{fasta,fa}
|
|
output:
|
|
-
|
|
- index:
|
|
type: file
|
|
description: bwa indexes file
|
|
pattern: *.{fasta,fa}.{amb,ann,bwt,pac,sa}
|
|
authors:
|
|
- @maxulysse
|