mirror of
https://github.com/MillironX/nf-core_modules.git
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18440df87a
* add genmap/mappability * Add index module. Remove -w parameter from mappability module. * change the output of genmap/index * fix the lint error which can not handle stageAs. * Apply suggestions from code review * Update main.nf * Update test.yml * Update main.nf * Update test.yml * Update tests/software/genmap/mappability/main.nf * Update software/genmap/mappability/main.nf * Update software/genmap/mappability/main.nf Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
48 lines
2.1 KiB
YAML
48 lines
2.1 KiB
YAML
- name: genmap index test_genmap_index
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command: nextflow run tests/software/genmap/index -entry test_genmap_index -c tests/config/nextflow.config
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tags:
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- genmap
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- genmap/index
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files:
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- path: output/index/genmap/index.ids.concat
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md5sum: da6caa25f62c5407ccdfbcce1fa92408
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- path: output/index/genmap/index.ids.limits
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md5sum: f82636c5da188aec131d3a809473eff1
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- path: output/index/genmap/index.info.concat
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md5sum: 8ba5273aa9e58722bf45b9cc39fc6bfe
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- path: output/index/genmap/index.info.limits
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md5sum: 3522f2811f4ddf04598809fc84a1459e
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- path: output/index/genmap/index.lf.drp
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md5sum: dd85d6a23af2c7adf2695658e3056c08
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- path: output/index/genmap/index.lf.drp.sbl
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md5sum: f1d3ff8443297732862df21dc4e57262
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- path: output/index/genmap/index.lf.drs
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md5sum: 93b885adfe0da089cdf634904fd59f71
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- path: output/index/genmap/index.lf.drv
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md5sum: e06b605496bd91b32afa3c4f56d934ac
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- path: output/index/genmap/index.lf.drv.sbl
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md5sum: 8dd6bb7329a71449b0a1b292b5999164
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- path: output/index/genmap/index.lf.pst
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md5sum: e8daba34298e99e42942435286f9b3f0
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- path: output/index/genmap/index.rev.lf.drp
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md5sum: 5d9107e3aeec0721553dd661d4365fef
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- path: output/index/genmap/index.rev.lf.drp.sbl
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md5sum: f1d3ff8443297732862df21dc4e57262
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- path: output/index/genmap/index.rev.lf.drs
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md5sum: 93b885adfe0da089cdf634904fd59f71
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- path: output/index/genmap/index.rev.lf.drv
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md5sum: df7e795edc0a034577a9d2599fe8cfeb
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- path: output/index/genmap/index.rev.lf.drv.sbl
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md5sum: 8dd6bb7329a71449b0a1b292b5999164
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- path: output/index/genmap/index.rev.lf.pst
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md5sum: e8daba34298e99e42942435286f9b3f0
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- path: output/index/genmap/index.sa.ind
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md5sum: e21e5c7ce887cc8e3d0fa44ab1019cab
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- path: output/index/genmap/index.sa.len
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md5sum: 5dfc20cfe8ed9892451461a8d402f51c
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- path: output/index/genmap/index.sa.val
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md5sum: 400ee7f2fe93b2000ae3a5da5e509730
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- path: output/index/genmap/index.txt.concat
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md5sum: b4303962e0c176107945f3405370e6ae
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- path: output/index/genmap/index.txt.limits
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md5sum: 4480a068db603e4c9a27bc4fa9ceaf14
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