nf-core_modules/tests/software/preseq/lcextrap/main.nf
Jose Espinosa-Carrasco 95e02f913f
Update comments with new style (#497)
* Update comment style on functions.nf files

* Update test main.nf comments

* Add meta for ggread
2021-05-12 14:56:46 +01:00

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Text

#!/usr/bin/env nextflow
nextflow.enable.dsl = 2
include { PRESEQ_LCEXTRAP } from '../../../../software/preseq/lcextrap/main.nf' addParams( options: [:] )
//
// Test with single-end data
//
workflow test_preseq_single_end {
input = [ [ id:'test', single_end:true ], // meta map
[ file('https://github.com/smithlabcode/preseq/raw/master/data/SRR1003759_5M_subset.mr', checkIfExists: true) ]
]
PRESEQ_LCEXTRAP ( input )
}
//
// Test with paired-end data
//
workflow test_preseq_paired_end {
input = [ [ id:'test', single_end:false ], // meta map
[ file('https://github.com/smithlabcode/preseq/raw/master/data/SRR1003759_5M_subset.mr', checkIfExists: true) ]
]
PRESEQ_LCEXTRAP ( input )
}