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* Add centrifuge module * Add centrifuge module * Add centrifuge module * Add centrifuge module
22 lines
920 B
YAML
22 lines
920 B
YAML
- name: centrifuge test_centrifuge_single_end
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command: nextflow run tests/modules/centrifuge -entry test_centrifuge_single_end -c tests/config/nextflow.config
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tags:
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- centrifuge
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files:
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- path: output/centrifuge/test.kreport.txt
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- path: output/centrifuge/test.report.txt
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- path: output/centrifuge/test.results.txt
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- path: output/centrifuge/test.unmapped.fastq.gz
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- path: output/centrifuge/versions.yml
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- name: centrifuge test_centrifuge_paired_end
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command: nextflow run tests/modules/centrifuge -entry test_centrifuge_paired_end -c tests/config/nextflow.config
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tags:
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- centrifuge
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files:
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- path: output/centrifuge/test.kreport.txt
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- path: output/centrifuge/test.report.txt
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- path: output/centrifuge/test.results.txt
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- path: output/centrifuge/test.unmapped.fastq.1.gz
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- path: output/centrifuge/test.unmapped.fastq.2.gz
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- path: output/centrifuge/versions.yml
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