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https://github.com/MillironX/nf-core_modules.git
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e745e167c1
* fix yml formatting * allow fastq.gz and fq.gz as file input, add meta.yml and test * fix yaml files * Revert "allow fastq.gz and fq.gz as file input, add meta.yml and test" This reverts commit 34002d7a7a8c7f7bb4600c3377f35c87849f71a4. * prettier magic! * fix comments for yamllint * remove node version number * fix linting errors Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
28 lines
1.4 KiB
YAML
28 lines
1.4 KiB
YAML
- name: isoseq3 cluster test_isoseq3_cluster
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command: nextflow run ./tests/modules/isoseq3/cluster -entry test_isoseq3_cluster -c ./tests/config/nextflow.config -c ./tests/modules/isoseq3/cluster/nextflow.config
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tags:
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- isoseq3
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- isoseq3/cluster
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files:
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- path: output/isoseq3/test.transcripts.bam
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md5sum: eb36697688099c757ef4196f54ad7d7a
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- path: output/isoseq3/test.transcripts.bam.pbi
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md5sum: db70cee03421822e9b8f9fb6b228f461
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- path: output/isoseq3/test.transcripts.cluster
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md5sum: d5059d856763fc5591332980bfc0d57b
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- path: output/isoseq3/test.transcripts.cluster_report.csv
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md5sum: 342d97dc10aedf80a45977edcb491c62
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- path: output/isoseq3/test.transcripts.hq.bam
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md5sum: 4c5f4ffb429107c9c9578419e07d6987
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- path: output/isoseq3/test.transcripts.hq.bam.pbi
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md5sum: 39ac3e957c8d55b0ce3f425d63baa154
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- path: output/isoseq3/test.transcripts.lq.bam
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md5sum: 710ca4bc58ac039d76775460e1c822a0
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- path: output/isoseq3/test.transcripts.lq.bam.pbi
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md5sum: 9b32036553bf3dced3065e6d0f36aef9
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- path: output/isoseq3/test.transcripts.singletons.bam
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md5sum: 0288577406b9d1e7356de9b4d7c2bb7c
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- path: output/isoseq3/test.transcripts.singletons.bam.pbi
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md5sum: 8e0e0681179c0c36209b49fa60783841
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- path: output/isoseq3/test.transcripts.transcriptset.xml
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contains: ["PacBio.DataSet.TranscriptSet"]
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