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5e18e36895
* Fixes for PR 371 * Fix tags * Add md5sum * Add md5sums for stringtie * Fix tests for modules where subtool = build * Fix pytest_software name conflicts * Change _ to / in test.yml tags * Nope...that didnt work * Fix sequenzautils/bam2seqz tests
17 lines
1.1 KiB
YAML
17 lines
1.1 KiB
YAML
- name: picard collectmultiplemetrics
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command: nextflow run ./tests/software/picard/collectmultiplemetrics -entry test_picard_collectmultiplemetrics -c tests/config/nextflow.config
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tags:
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- picard
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- picard/collectmultiplemetrics
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files:
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# These can't be md5'd consistently
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- path: ./output/picard/test.CollectMultipleMetrics.alignment_summary_metrics
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- path: ./output/picard/test.CollectMultipleMetrics.insert_size_metrics
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- path: ./output/picard/test.CollectMultipleMetrics.quality_distribution_metrics
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- path: ./output/picard/test.CollectMultipleMetrics.quality_by_cycle_metrics
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- path: ./output/picard/test.CollectMultipleMetrics.base_distribution_by_cycle_metrics
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- path: ./output/picard/test.CollectMultipleMetrics.quality_by_cycle.pdf
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- path: ./output/picard/test.CollectMultipleMetrics.quality_distribution.pdf
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- path: ./output/picard/test.CollectMultipleMetrics.read_length_histogram.pdf
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- path: ./output/picard/test.CollectMultipleMetrics.base_distribution_by_cycle.pdf
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- path: ./output/picard/test.CollectMultipleMetrics.insert_size_histogram.pdf
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