mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-12-22 11:08:17 +00:00
e937c7950a
* Update README * Rename pytest_software.yml to pytest_modules.yml * Rename main software directory to modules * Remove deprecated modules * Rename tests software to modules * Replace paths for tests in pytest_modules.yml * Replace software with modules in Github Actions * Replace software with modules in main.nf tests * Rename software to modules in test.yml
14 lines
423 B
Text
14 lines
423 B
Text
#!/usr/bin/env nextflow
|
|
|
|
nextflow.enable.dsl = 2
|
|
|
|
include { QCAT } from '../../../modules/qcat/main.nf' addParams( options: [:] )
|
|
|
|
workflow test_qcat {
|
|
input = [ [ id:'test' ], // meta map
|
|
[ file("https://github.com/nf-core/test-datasets/raw/nanoseq/fastq/nondemultiplexed/sample_nobc_dx.fastq.gz", checkIfExists: true) ]
|
|
]
|
|
barcode_kit = 'NBD103/NBD104'
|
|
|
|
QCAT ( input, barcode_kit )
|
|
}
|