mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2025-01-06 22:32:09 -05:00
22 lines
556 B
Text
22 lines
556 B
Text
#!/usr/bin/env nextflow
|
|
|
|
nextflow.preview.dsl = 2
|
|
|
|
include { BEDTOOLS_SLOPREFSEQ } from '../../sloprefseq/main.nf' addParams( options: [publish_dir:'test_bed_file'])
|
|
|
|
// Define input channels
|
|
|
|
// Run the workflow
|
|
workflow test_bed_file{
|
|
def input = []
|
|
input = [ [ id:'test', single_end:true ],
|
|
[ file("${baseDir}/input/A.bed", checkIfExists: true),
|
|
file("${baseDir}/input/genome.sizes", checkIfExists: true) ] ]
|
|
|
|
BEDTOOLS_SLOPREFSEQ ( input, [ publish_dir:'test_bed_file' ] )
|
|
|
|
}
|
|
|
|
workflow {
|
|
test_bed_file()
|
|
}
|