mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-12-23 03:28:17 +00:00
257078bb39
* add BP to strelka/somatic * merge conflicts * update strelka modules for BP * update strelka modules for BP * apply suggestions from code review
25 lines
1.1 KiB
YAML
25 lines
1.1 KiB
YAML
- name: strelka somatic test_strelka_somatic
|
|
command: nextflow run tests/modules/strelka/somatic -entry test_strelka_somatic -c tests/config/nextflow.config
|
|
tags:
|
|
- strelka
|
|
- strelka/somatic
|
|
files:
|
|
- path: output/strelka/test.somatic_indels.vcf.gz
|
|
- path: output/strelka/test.somatic_indels.vcf.gz.tbi
|
|
md5sum: 4cb176febbc8c26d717a6c6e67b9c905
|
|
- path: output/strelka/test.somatic_snvs.vcf.gz
|
|
- path: output/strelka/test.somatic_snvs.vcf.gz.tbi
|
|
md5sum: 4cb176febbc8c26d717a6c6e67b9c905
|
|
|
|
- name: strelka somatic test_strelka__best_practices_somatic
|
|
command: nextflow run tests/modules/strelka/somatic -entry test_strelka__best_practices_somatic -c tests/config/nextflow.config
|
|
tags:
|
|
- strelka
|
|
- strelka/somatic
|
|
files:
|
|
- path: output/strelka/test.somatic_indels.vcf.gz
|
|
- path: output/strelka/test.somatic_indels.vcf.gz.tbi
|
|
md5sum: 4cb176febbc8c26d717a6c6e67b9c905
|
|
- path: output/strelka/test.somatic_snvs.vcf.gz
|
|
- path: output/strelka/test.somatic_snvs.vcf.gz.tbi
|
|
md5sum: 4cb176febbc8c26d717a6c6e67b9c905
|