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17 lines
706 B
YAML
17 lines
706 B
YAML
- name: Run fastqc single-end test workflow
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command: nextflow run ./tests/software/fastqc/ -profile docker -entry test_single_end -c tests/config/nextflow.config
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tags:
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- fastqc
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files:
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- path: output/test_single_end/test_fastqc.html
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- path: output/test_single_end/test_fastqc.zip
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- name: Run fastqc paired-end test workflow
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command: nextflow run ./tests/software/fastqc/ -profile docker -entry test_paired_end -c tests/config/nextflow.config
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tags:
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- fastqc
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files:
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- path: output/test_paired_end/test_1_fastqc.html
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- path: output/test_paired_end/test_2_fastqc.html
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- path: output/test_paired_end/test_1_fastqc.zip
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- path: output/test_paired_end/test_2_fastqc.zip
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