nf-core_modules/modules/raxmlng/meta.yml
Matthias Hörtenhuber e745e167c1
Fix formatting in yaml files, add yamllint config (#1279)
* fix yml formatting

* allow fastq.gz and fq.gz as file input, add meta.yml and test

* fix yaml files

* Revert "allow fastq.gz and fq.gz as file input, add meta.yml and test"

This reverts commit 34002d7a7a8c7f7bb4600c3377f35c87849f71a4.

* prettier magic!

* fix comments for yamllint

* remove node version number

* fix linting errors

Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
2022-02-15 11:15:27 +00:00

38 lines
1.1 KiB
YAML

name: raxmlng
description: RAxML-NG is a phylogenetic tree inference tool which uses maximum-likelihood (ML) optimality criterion.
keywords:
- phylogeny
- newick
- maximum likelihood
tools:
- raxmlng:
description: RAxML-NG is a phylogenetic tree inference tool which uses maximum-likelihood (ML) optimality criterion.
homepage: https://github.com/amkozlov/raxml-ng
documentation: https://github.com/amkozlov/raxml-ng/wiki
tool_dev_url: https://github.com/amkozlov/raxml-ng
doi: doi.org/10.1093/bioinformatics/btz305
licence: ["GPL v2-or-later"]
input:
- alignment:
type: file
description: A FASTA format multiple sequence alignment file
pattern: "*.{fasta,fas,fa,mfa}"
output:
- versions:
type: file
description: File containing software versions
pattern: "versions.yml"
- phylogeny:
type: file
description: A phylogeny in Newick format
pattern: "*.{raxml.bestTree}"
- phylogeny_bootstrapped:
type: file
description: A phylogeny in Newick format with bootstrap values
pattern: "*.{raxml.support}"
authors:
- "@avantonder"
- "@aunderwo"