nf-core_modules/modules/custom/dumpsoftwareversions/main.nf
2022-02-04 09:53:32 +01:00

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process CUSTOM_DUMPSOFTWAREVERSIONS {
label 'process_low'
// Requires `pyyaml` which does not have a dedicated container but is in the MultiQC container
conda (params.enable_conda ? "bioconda::multiqc=1.11" : null)
container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
'https://depot.galaxyproject.org/singularity/multiqc:1.11--pyhdfd78af_0' :
'quay.io/biocontainers/multiqc:1.11--pyhdfd78af_0' }"
input:
path versions
output:
path "software_versions.yml" , emit: yml
path "software_versions_mqc.yml", emit: mqc_yml
path "versions.yml" , emit: versions
when:
task.ext.when == null || task.ext.when
script:
def args = task.ext.args ?: ''
template 'dumpsoftwareversions.py'
}