mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-14 13:43:09 +00:00
42 lines
1.1 KiB
YAML
42 lines
1.1 KiB
YAML
name: legsta
|
|
description: Typing of clinical and environmental isolates of Legionella pneumophila
|
|
keywords:
|
|
- bacteria
|
|
- legionella
|
|
tools:
|
|
- legsta:
|
|
description: In silico Legionella pneumophila Sequence Based Typing
|
|
homepage: https://github.com/tseemann/legsta
|
|
documentation: https://github.com/tseemann/legsta
|
|
tool_dev_url: https://github.com/tseemann/legsta
|
|
doi: ""
|
|
licence: ['GPL v3']
|
|
|
|
input:
|
|
- meta:
|
|
type: map
|
|
description: |
|
|
Groovy Map containing sample information
|
|
e.g. [ id:'test', single_end:false ]
|
|
- seqs:
|
|
type: file
|
|
description: FASTA, GenBank or EMBL formatted files
|
|
pattern: "*.{fasta,gbk,embl}"
|
|
|
|
output:
|
|
- meta:
|
|
type: map
|
|
description: |
|
|
Groovy Map containing sample information
|
|
e.g. [ id:'test', single_end:false ]
|
|
- versions:
|
|
type: file
|
|
description: File containing software versions
|
|
pattern: "versions.yml"
|
|
- tsv:
|
|
type: file
|
|
description: Tab-delimited summary of the results
|
|
pattern: "*.{tsv}"
|
|
|
|
authors:
|
|
- "@rpetit3"
|