mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-11 04:33:10 +00:00
e745e167c1
* fix yml formatting * allow fastq.gz and fq.gz as file input, add meta.yml and test * fix yaml files * Revert "allow fastq.gz and fq.gz as file input, add meta.yml and test" This reverts commit 34002d7a7a8c7f7bb4600c3377f35c87849f71a4. * prettier magic! * fix comments for yamllint * remove node version number * fix linting errors Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
46 lines
1 KiB
YAML
46 lines
1 KiB
YAML
name: ucsc_bigwigaverageoverbed
|
|
description: compute average score of bigwig over bed file
|
|
keywords:
|
|
- bigwig
|
|
- bedGraph
|
|
tools:
|
|
- ucsc:
|
|
description: Compute average score of big wig over each bed, which may have introns.
|
|
homepage: None
|
|
documentation: None
|
|
tool_dev_url: None
|
|
doi: ""
|
|
licence: ["varies; see http://genome.ucsc.edu/license"]
|
|
|
|
input:
|
|
- meta:
|
|
type: map
|
|
description: |
|
|
Groovy Map containing sample information
|
|
e.g. [ id:'test', single_end:false ]
|
|
- bed:
|
|
type: file
|
|
description: bed file
|
|
pattern: "*.{bed}"
|
|
- bigwig:
|
|
type: file
|
|
description: bigwig file
|
|
pattern: "*.{bigwig,bw}"
|
|
|
|
output:
|
|
- meta:
|
|
type: map
|
|
description: |
|
|
Groovy Map containing sample information
|
|
e.g. [ id:'test', single_end:false ]
|
|
- versions:
|
|
type: file
|
|
description: File containing software versions
|
|
pattern: "versions.yml"
|
|
- tab:
|
|
type: file
|
|
description: tab file
|
|
pattern: "*.{tab}"
|
|
|
|
authors:
|
|
- "@jianhong"
|