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f3ffa69b8d
* feat(dragmap): Add initial hastable module * feat(dragmap): Add initial align module * test(dragmap): Remove md5sum Forgot sam files have a header. Might pipe this through samtools. * build(dragmap): Add mulled container * chore(dragmap): Update prefix * feat(dragmap): Output a bam file * feat(dragmap): Add log files * Update modules/dragmap/align/meta.yml Co-authored-by: Jose Espinosa-Carrasco <kadomu@gmail.com>
30 lines
838 B
YAML
30 lines
838 B
YAML
name: dragmap_hashtable
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description: Create DRAGEN hashtable for reference genome
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keywords:
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- index
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- fasta
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- genome
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- reference
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tools:
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- dragmap:
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description: Dragmap is the Dragen mapper/aligner Open Source Software.
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homepage: https://github.com/Illumina/dragmap
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documentation: https://github.com/Illumina/dragmap
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tool_dev_url: https://github.com/Illumina/dragmap#basic-command-line-usage
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doi: ""
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licence: ['GPL v3']
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input:
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- fasta:
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type: file
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description: Input genome fasta file
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output:
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- hashmap:
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type: file
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description: DRAGMAP hash table
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pattern: "*.{cmp,.bin,.txt}"
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- versions:
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type: file
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description: File containing software versions
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pattern: "versions.yml"
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authors:
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- "@Emiller88"
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