mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-11 12:43:09 +00:00
7111e571cc
* fix(preseq): Update lcextrap file name * chore(preseq): Bump lcextrap image * feat: Initialize preseq c_curve * docs(preseq): Update documentation
25 lines
618 B
Text
25 lines
618 B
Text
#!/usr/bin/env nextflow
|
|
|
|
nextflow.enable.dsl = 2
|
|
|
|
include { PRESEQ_CCURVE } from '../../../../modules/preseq/ccurve/main.nf'
|
|
|
|
workflow test_preseq_ccurve_single_end {
|
|
|
|
input = [
|
|
[ id:'test', single_end:false ], // meta map
|
|
file(params.test_data['sarscov2']['illumina']['test_paired_end_bam'], checkIfExists: true)
|
|
]
|
|
|
|
PRESEQ_CCURVE ( input )
|
|
}
|
|
|
|
workflow test_preseq_ccurve_paired_end {
|
|
|
|
input = [
|
|
[ id:'test', single_end:false ], // meta map
|
|
file(params.test_data['sarscov2']['illumina']['test_paired_end_bam'], checkIfExists: true)
|
|
]
|
|
|
|
PRESEQ_CCURVE ( input )
|
|
}
|