mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-11 12:43:09 +00:00
043a7d1e3c
* remove deprecated test tags * fix bowtie, gatk4/applybsqr * fix gatk4 baserecalibrator * fixed shovill * fixed yara/mapper * fixed kallistobustools/ref paths
17 lines
639 B
YAML
17 lines
639 B
YAML
- name: gatk4 fastqtosam test_gatk4_fastqtosam_single_end
|
|
command: nextflow run tests/software/gatk4/fastqtosam -entry test_gatk4_fastqtosam_single_end -c tests/config/nextflow.config
|
|
tags:
|
|
- gatk4/fastqtosam
|
|
- gatk4
|
|
files:
|
|
- path: output/gatk4/test.bam
|
|
md5sum: 4967100b2e4912c0e4ce0976d946bafb
|
|
|
|
- name: gatk4 fastqtosam test_gatk4_fastqtosam_paired_end
|
|
command: nextflow run tests/software/gatk4/fastqtosam -entry test_gatk4_fastqtosam_paired_end -c tests/config/nextflow.config
|
|
tags:
|
|
- gatk4
|
|
- gatk4/fastqtosam
|
|
files:
|
|
- path: output/gatk4/test.bam
|
|
md5sum: 4967100b2e4912c0e4ce0976d946bafb
|