nf-core_modules/tests/software/stringtie/merge/test.yml
Yuk Kei Wan 6ad50f8ec4
Add stringtie merge module (from nanoseq modules) (#475)
* add stringtie merge module

* add md5sum and path for stringtie.merged.gtf

* fix errors

* try fixing stringtie check error

* add tag

* remove unreproducible md5sum

* address PR suggestions

* hopefully fix linting error
2021-05-03 07:18:51 +02:00

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YAML

- name: stringtie forward-strand merge
command: nextflow run ./tests/software/stringtie/merge/ -entry test_stringtie_forward_merge -c tests/config/nextflow.config
tags:
- stringtie
- stringtie/merge
files:
- path: ./output/test_stringtie_forward_merge/stringtie.merged.gtf
md5sum: 676aa20a2d7a3db18136cdc7ba183099
- name: stringtie reverse-strand merge
command: nextflow run ./tests/software/stringtie/merge/ -entry test_stringtie_reverse_merge -c tests/config/nextflow.config
tags:
- stringtie
- stringtie/merge
files:
- path: ./output/test_stringtie_reverse_merge/stringtie.merged.gtf
md5sum: 67e5102722ecaeea1fb44d1ec0953474