mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-13 13:23:09 +00:00
043a7d1e3c
* remove deprecated test tags * fix bowtie, gatk4/applybsqr * fix gatk4 baserecalibrator * fixed shovill * fixed yara/mapper * fixed kallistobustools/ref paths
25 lines
831 B
YAML
25 lines
831 B
YAML
- name: tiddit sv
|
|
command: nextflow run ./tests/software/tiddit/sv -entry test_tiddit_sv -c tests/config/nextflow.config
|
|
tags:
|
|
- tiddit
|
|
- tiddit/sv
|
|
files:
|
|
- path: output/tiddit/test.ploidy.tab
|
|
md5sum: 45e050b0e204f0a5a3a99627cc440eaa
|
|
- path: output/tiddit/test.signals.tab
|
|
md5sum: 25408a43dbdd01c08e33a6d670f2bb84
|
|
- path: output/tiddit/test.vcf
|
|
should_exist: true
|
|
|
|
- name: tiddit sv no ref
|
|
command: nextflow run ./tests/software/tiddit/sv -entry test_tiddit_sv_no_ref -c tests/config/nextflow.config
|
|
tags:
|
|
- tiddit
|
|
- tiddit/sv
|
|
files:
|
|
- path: output/tiddit/test.ploidy.tab
|
|
md5sum: 45e050b0e204f0a5a3a99627cc440eaa
|
|
- path: output/tiddit/test.signals.tab
|
|
md5sum: 25408a43dbdd01c08e33a6d670f2bb84
|
|
- path: output/tiddit/test.vcf
|
|
should_exist: true
|