Adam Talbot 7e8ad56688 module FASTP: Support for interleaved FASTQ (#1891) ... * 1882 FASTP now supports interleaved FASTQ files Changes: - single_end FASTP pipes the FASTQ file - Using args, it can be configured for interleaved in `--interleaved_in` - Out is automatically interleaved if input is paired end. - Removed md5sum checks for FASTQ files as compression seemed to cause differences - Instead, we check inside the FASTQ files for content. Relates to #1882 Co-authored-by: Matthias De Smet <11850640+matthdsm@users.noreply.github.com>		2022-07-19 16:27:15 +01:00
..
nextflow.config
pytest_modules.yml	added bcftools convert (#1906)	2022-07-19 15:09:40 +02:00
pytest_modules_test.yml	Add new module: Pear (#1779)	2022-07-15 10:28:31 +02:00
test_data.config	module FASTP: Support for interleaved FASTQ (#1891)	2022-07-19 16:27:15 +01:00