nf-core_modules/tests/modules/samtools/view/test.yml

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YAML

- name: samtools view test_samtools_view
command: nextflow run ./tests/modules/samtools/view -entry test_samtools_view -c ./tests/config/nextflow.config -c ./tests/modules/samtools/view/nextflow.config
tags:
- samtools/view
- samtools
files:
- path: output/samtools/test.bam
md5sum: 8fb1e82f76416e9e30fc6b2357e2cf13
- name: samtools view test_samtools_view_cram
command: nextflow run ./tests/modules/samtools/view -entry test_samtools_view_cram -c ./tests/config/nextflow.config -c ./tests/modules/samtools/view/nextflow.config
tags:
- samtools/view
- samtools
files:
- path: output/samtools/test.cram
- name: samtools view test_samtools_view_stubs
command: nextflow run ./tests/modules/samtools/view -entry test_samtools_view -c ./tests/config/nextflow.config -c ./tests/modules/samtools/view/nextflow.config -stub-run
tags:
- samtools/view
- samtools
files:
- path: output/samtools/test.bam