mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-12-25 12:08:16 +00:00
31 lines
1.3 KiB
YAML
31 lines
1.3 KiB
YAML
- name: gatk4 samtofastq test_gatk4_samtofastq_single_end
|
|
command: nextflow run ./tests/modules/gatk4/samtofastq -entry test_gatk4_samtofastq_single_end -c ./tests/config/nextflow.config -c ./tests/modules/gatk4/samtofastq/nextflow.config
|
|
tags:
|
|
- gatk4
|
|
- gatk4/samtofastq
|
|
files:
|
|
- path: output/gatk4/test.fastq.gz
|
|
md5sum: 50ace41d4c24467f24f8b929540a7797
|
|
- path: output/gatk4/versions.yml
|
|
|
|
- name: gatk4 samtofastq test_gatk4_samtofastq_paired_end
|
|
command: nextflow run ./tests/modules/gatk4/samtofastq -entry test_gatk4_samtofastq_paired_end -c ./tests/config/nextflow.config -c ./tests/modules/gatk4/samtofastq/nextflow.config
|
|
tags:
|
|
- gatk4
|
|
- gatk4/samtofastq
|
|
files:
|
|
- path: output/gatk4/test_1.fastq.gz
|
|
md5sum: cfea607c9d75fd9ea9704780ad3a499c
|
|
- path: output/gatk4/test_2.fastq.gz
|
|
md5sum: 613bf64c023609e1c62ad6ce9e4be8d7
|
|
- path: output/gatk4/versions.yml
|
|
|
|
- name: gatk4 samtofastq test_gatk4_samtofastq_paired_end_stubs
|
|
command: nextflow run ./tests/modules/gatk4/samtofastq -entry test_gatk4_samtofastq_paired_end_stubs -c ./tests/config/nextflow.config -c ./tests/modules/gatk4/samtofastq/nextflow.config -stub-run
|
|
tags:
|
|
- gatk4
|
|
- gatk4/samtofastq
|
|
files:
|
|
- path: output/gatk4/test_1.fastq.gz
|
|
- path: output/gatk4/test_2.fastq.gz
|
|
- path: output/gatk4/versions.yml
|