nf-core_modules/tests/software/bcftools/stats/test.yml at 6c70d65ae6c59a78fdc13072a114bfa530325b0a - millironx/nf-core_modules - Milliron X Code: Code hosting for cattle or technology, but especially anything to do with both of them

millironx/nf-core_modules

mirror of https://github.com/MillironX/nf-core_modules.git synced 2024-11-11 12:43:09 +00:00

Mark-S-Hill 889465cb2b

update test data paths (#373 )

* update test data paths

* Update test md5sums

* gatk test fixes & update variantfiltration main

* few extra fixes after review

* fix suspected format error

* Update software/gatk4/variantfiltration/main.nf

* Update software/gatk4/variantfiltration/main.nf

* Apply suggestions from code review

Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>

2021-03-24 18:14:11 +00:00

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 - name: bcftools stats test_bcftools_stats
   command: nextflow run tests/software/bcftools/stats -entry test_bcftools_stats -c tests/config/nextflow.config
   tags:
     - bcftools
     - bcftools_stats
   files:
     - path: output/bcftools/test.bcftools_stats.txt
       md5sum: c4c5938add12a20050eec3782c8ad623