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https://github.com/MillironX/nf-core_modules.git
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ee90e7af77
* Add default output dir for modules that create indices * Change path for index module test output * Fix bowtie2/align tests * Fixing bowtie/align tests * Fix genomegenerate test * Fixing README linting
31 lines
1.3 KiB
YAML
31 lines
1.3 KiB
YAML
- name: star genomegenerate
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command: nextflow run ./tests/software/star/genomegenerate -entry test_star_genomegenerate -c tests/config/nextflow.config
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tags:
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- star
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- star_genomegenerate
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files:
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- path: ./output/index/star/Genome
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md5sum: 323c992bac354f93073ce0fc43f222f8
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- path: ./output/index/star/SA
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md5sum: 3e70e4fc6d031e1915bb510727f2c559
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- path: ./output/index/star/SAindex
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md5sum: a94198b95a245d4f64af2a7133b6ec7b
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- path: ./output/index/star/chrLength.txt
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md5sum: f2bea3725fe1c01420c57fb73bdeb31a
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- path: ./output/index/star/chrNameLength.txt
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md5sum: c7ceb0a8827b2ea91c386933bee48742
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- path: ./output/index/star/chrStart.txt
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md5sum: faf5c55020c99eceeef3e34188ac0d2f
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- path: ./output/index/star/exonGeTrInfo.tab
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md5sum: aec6e7a1ae3fc8c638ce5a9ce9c886b6
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- path: ./output/index/star/exonInfo.tab
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md5sum: 42eca6ebc2dc72d9d6e6b3acd3714343
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- path: ./output/index/star/sjdbInfo.txt
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md5sum: 1082ab459363b3f2f7aabcef0979c1ed
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- path: ./output/index/star/sjdbList.fromGTF.out.tab
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md5sum: d41d8cd98f00b204e9800998ecf8427e
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- path: ./output/index/star/sjdbList.out.tab
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md5sum: d41d8cd98f00b204e9800998ecf8427e
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- path: ./output/index/star/transcriptInfo.tab
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md5sum: 8fbe69abbbef4f89da3854873984dbac
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- path: ./output/index/star/genomeParameters.txt
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