nf-core_modules/tests/software/bwamem2/index/test.yml
Jose Espinosa-Carrasco ee90e7af77
Add default output dir for modules that create indices, updated (#336)
* Add default output dir for modules that create indices

* Change path for index module test output

* Fix bowtie2/align tests

* Fixing bowtie/align tests

* Fix genomegenerate test

* Fixing README linting
2021-03-23 17:55:01 +00:00

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YAML

- name: bwamem2 index
command: nextflow run ./tests/software/bwamem2/index -entry test_bwamem2_index -c tests/config/nextflow.config
tags:
- bwamem2
- bwamem2_index
files:
- path: ./output/index/bwamem2/test_genome.fasta.amb
md5sum: 3a68b8b2287e07dd3f5f95f4344ba76e
- path: ./output/index/bwamem2/test_genome.fasta.pac
md5sum: 983e3d2cd6f36e2546e6d25a0da78d66
- path: ./output/index/bwamem2/test_genome.fasta.0123
md5sum: b02870de80106104abcb03cd9463e7d8
- path: ./output/index/bwamem2/test_genome.fasta.bwt.2bit.64
md5sum: d097a1b82dee375d41a1ea69895a9216
- path: ./output/index/bwamem2/test_genome.fasta.ann
md5sum: c32e11f6c859f166c7525a9c1d583567