yocra3 5e3c9dfbf0 Add gatk4/baserecalibrator (#327) ... * Add gatk4 BaseRecalibrator * Solve format in main.nf * Correct functions * Add pytest		2021-03-23 18:32:37 +01:00
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applybqsr	Add gatk4/applybqsr (#331)	2021-03-23 14:15:26 +01:00
baserecalibrator	Add gatk4/baserecalibrator (#327)	2021-03-23 18:32:37 +01:00
bedtointervallist	Converge test data usage (#249)	2021-03-04 10:10:57 +00:00
createsequencedictionary	Rename gatk/createsequencedictionary -> gatk4/createsequencedictionary (#260)	2021-03-08 14:45:46 +01:00
fastqtosam	add gatk4/fastqtosam #198 (#311)	2021-03-22 18:26:02 +00:00
mergebamalignment	add mergebamalignment (#259)	2021-03-17 15:56:56 +01:00
mergevcfs	Exchange VCF data by sarscov2 data (#261)	2021-03-09 10:04:08 +01:00
revertsam	Converge test data usage (#249)	2021-03-04 10:10:57 +00:00
samtofastq	Converge test data usage (#249)	2021-03-04 10:10:57 +00:00
splitncigarreads	Converge test data usage (#249)	2021-03-04 10:10:57 +00:00
variantfiltration	added gatk4 variantfiltration (#265)	2021-03-17 09:42:35 +01:00