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* Add files via upload * Add files via upload * Add files via upload * Add files via upload * Update pytest_software.yml * Update main.nf * fix linting error * Delete test.yml * Create functions.nf * Update main.nf * change test data * revert to !>=20.11.0-edge
15 lines
519 B
Text
15 lines
519 B
Text
#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { UCSC_BED12TOBIGBED } from '../../../../software/ucsc/bed12tobigbed/main.nf' addParams( options: [:] )
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workflow test_ucsc_bed12tobigbed {
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def input = []
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input = [ [ id: 'test' ], // meta map
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[ file("${launchDir}/tests/data/genomics/sarscov2/bed/test.bed12", checkIfExists: true )] ]
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sizes = file("${launchDir}/tests/data/genomics/sarscov2/general/test.genome.sizes", checkIfExists: true)
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UCSC_BED12TOBIGBED ( input, sizes )
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}
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