mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-14 13:43:09 +00:00
98ed71c8f6
* feat(homer): Add pos2bed module * test(homer): Pass bed format * test(homer): Add upstream dependencies to avoid regressions * Update modules/homer/pos2bed/main.nf Co-authored-by: FriederikeHanssen <Friederike.hanssen@qbic.uni-tuebingen.de>
42 lines
1.1 KiB
YAML
42 lines
1.1 KiB
YAML
name: "homer_pos2bed"
|
|
description: Coverting from HOMER peak to BED file formats
|
|
keywords:
|
|
- peaks
|
|
tools:
|
|
- "homer":
|
|
description: |
|
|
HOMER (Hypergeometric Optimization of Motif EnRichment) is a suite of tools for Motif Discovery and next-gen sequencing analysis.
|
|
homepage: "http://homer.ucsd.edu/homer/index.html"
|
|
documentation: "http://homer.ucsd.edu/homer/"
|
|
tool_dev_url: "http://homer.ucsd.edu/homer/ngs/miscellaneous.html"
|
|
doi: 10.1016/j.molcel.2010.05.004.
|
|
licence: ["GPL-3.0-or-later"]
|
|
|
|
input:
|
|
- meta:
|
|
type: map
|
|
description: |
|
|
Groovy Map containing sample information
|
|
e.g. [ id:'test', single_end:false ]
|
|
- tagDir:
|
|
type: directory
|
|
description: "The 'Tag Directory'"
|
|
pattern: "tagDir"
|
|
|
|
output:
|
|
- meta:
|
|
type: map
|
|
description: |
|
|
Groovy Map containing sample information
|
|
e.g. [ id:'test', single_end:false ]
|
|
- bed:
|
|
type: file
|
|
description: BED file
|
|
pattern: "*.bed"
|
|
- versions:
|
|
type: file
|
|
description: File containing software versions
|
|
pattern: "versions.yml"
|
|
|
|
authors:
|
|
- "@Emiller88"
|