nf-core_modules/tests/software/gatk4
Mark-S-Hill 889465cb2b
update test data paths (#373)
* update test data paths

* Update test md5sums

* gatk test fixes & update variantfiltration main

* few extra fixes after review

* fix suspected format error

* Update software/gatk4/variantfiltration/main.nf

* Update software/gatk4/variantfiltration/main.nf

* Apply suggestions from code review

Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
2021-03-24 18:14:11 +00:00
..
applybqsr Re-organise all test data (#354) 2021-03-24 09:53:41 +00:00
baserecalibrator Re-organise all test data (#354) 2021-03-24 09:53:41 +00:00
bedtointervallist Re-organise all test data (#354) 2021-03-24 09:53:41 +00:00
createsequencedictionary Re-organise all test data (#354) 2021-03-24 09:53:41 +00:00
fastqtosam Re-organise all test data (#354) 2021-03-24 09:53:41 +00:00
mergebamalignment Re-organise all test data (#354) 2021-03-24 09:53:41 +00:00
mergevcfs Re-organise all test data (#354) 2021-03-24 09:53:41 +00:00
revertsam Re-organise all test data (#354) 2021-03-24 09:53:41 +00:00
samtofastq Re-organise all test data (#354) 2021-03-24 09:53:41 +00:00
splitncigarreads Re-organise all test data (#354) 2021-03-24 09:53:41 +00:00
variantfiltration update test data paths (#373) 2021-03-24 18:14:11 +00:00