mirror of
https://github.com/MillironX/nf-core_modules.git
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3eff67f54d
* added new module snpsift/split * added options.args * added .vcf.gz to input * removed test and updated to new NF DSL2 syntax * Updated to new NF DSL2 syntax * added option to join vcf files Co-authored-by: Robert A. Petit III <robbie.petit@gmail.com> Co-authored-by: FriederikeHanssen <Friederike.hanssen@qbic.uni-tuebingen.de>
32 lines
1.1 KiB
YAML
32 lines
1.1 KiB
YAML
- name: snpsift split test_snpsift_split_base
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command: nextflow run tests/modules/snpsift/split -entry test_snpsift_split_base -c tests/config/nextflow.config
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tags:
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- snpsift/split
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- snpsift
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files:
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- path: output/snpsift/test.rnaseq.chr22.vcf
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md5sum: 1bb8724dcbe6fa3101a814c0be51d1ea
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- path: output/snpsift/versions.yml
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md5sum: 2b9f6b788db6c4fcbf258db763d8fab7
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- name: snpsift split test_snpsift_split_gz
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command: nextflow run tests/modules/snpsift/split -entry test_snpsift_split_gz -c tests/config/nextflow.config
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tags:
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- snpsift/split
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- snpsift
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files:
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- path: output/snpsift/test.MT192765.1.vcf
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md5sum: 9d491cfa84067450342ba8e66c75e5b8
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- path: output/snpsift/versions.yml
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md5sum: 6bd63376670d6c1445caea2f31a3f579
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- name: snpsift split test_snpsift_join
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command: nextflow run tests/modules/snpsift/split -entry test_snpsift_join -c tests/config/nextflow.config
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tags:
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- snpsift/split
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- snpsift
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files:
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- path: output/snpsift/test.joined.vcf
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md5sum: c400c7458524d889e0967b06ed72534f
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- path: output/snpsift/versions.yml
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md5sum: be54682a73d3b91a17eacc0e533448f5
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