nf-core_modules/tests/software/blast/makeblastdb/test.yml
Robert A. Petit III c9256616b9
update tests for new config (#384)
* update tests for new config

* fix quast, update more

* more updates!

* more tests updated

* fix tests, added tabix gff3.gz

* Delete main.nf

Removing SPAdes from PR to avoid merge conflicts with https://github.com/nf-core/modules/pull/396

Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
2021-04-01 20:22:06 +01:00

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YAML

- name: blast_makeblastdb
command: nextflow run ./tests/software/blast/makeblastdb -entry test_blast_makeblastdb -c tests/config/nextflow.config
tags:
- blast
- blast_makeblastdb
files:
- path: ./output/blast/blast_db/genome.fasta.nsq
md5sum: 982cbc7d9e38743b9b1037588862b9da
- path: ./output/blast/blast_db/genome.fasta.nin
- path: ./output/blast/blast_db/genome.fasta
md5sum: 6e9fe4042a72f2345f644f239272b7e6
- path: ./output/blast/blast_db/genome.fasta.nhr
md5sum: f4b4ddb034fd3dd7b25c89e9d50c004e
- path: ./output/blast/blast_db/genome.fasta.ndb
md5sum: 45f2daf9769957ff80868dd3d80d30a3
- path: ./output/blast/blast_db/genome.fasta.not
md5sum: 1e53e9d08f1d23af0299cfa87478a7bb
- path: ./output/blast/blast_db/genome.fasta.nto
md5sum: 33cdeccccebe80329f1fdbee7f5874cb
- path: ./output/blast/blast_db/genome.fasta.ntf
md5sum: 1f6027d443e67a98ad0edc2d39971b0c