nf-core_modules/tests/modules/bedtools
Chris Cheshire e8b33e6eb1
bedtools/genomecov updated to allow for providing a per-sample scale factor (#799)
* hifiasm copied from fastqc

* hifiasm tests init from fastqc

* meta.yml init; test.yml and main.nf for printing version

* Add hifiasm version printing

* Removed spaced on an empty line

* Reverted hifiasm from main

* Added genomecov scale module

* Updated tagging

* Removed extra module - began merging

* Removed extra module tests

* Updated genomecov to take a scale value

* Updated line endings

* Removed redundant test

* Update tests/modules/bedtools/genomecov/main.nf

Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>

* Added checking for existing -bg arg

* Update modules/bedtools/genomecov/main.nf

Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>

* Update modules/bedtools/genomecov/main.nf

Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>

Co-authored-by: Sviatoslav Sidorov <sviatoslav.sidorov@crick.ac.uk>
Co-authored-by: Svyatoslav Sidorov <svet.sidorov@gmail.com>
Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
2021-10-28 17:50:25 +01:00
..
bamtobed Rename software/ directory to modules/ to re-organise module structure (#567) 2021-07-07 10:10:18 +01:00
complement Rename software/ directory to modules/ to re-organise module structure (#567) 2021-07-07 10:10:18 +01:00
genomecov bedtools/genomecov updated to allow for providing a per-sample scale factor (#799) 2021-10-28 17:50:25 +01:00
getfasta Rename software/ directory to modules/ to re-organise module structure (#567) 2021-07-07 10:10:18 +01:00
intersect Rename software/ directory to modules/ to re-organise module structure (#567) 2021-07-07 10:10:18 +01:00
makewindows Add bedtools/makewindows module (#658) 2021-09-07 14:36:06 -04:00
maskfasta Rename software/ directory to modules/ to re-organise module structure (#567) 2021-07-07 10:10:18 +01:00
merge Rename software/ directory to modules/ to re-organise module structure (#567) 2021-07-07 10:10:18 +01:00
slop Rename software/ directory to modules/ to re-organise module structure (#567) 2021-07-07 10:10:18 +01:00
sort Rename software/ directory to modules/ to re-organise module structure (#567) 2021-07-07 10:10:18 +01:00
subtract Rename software/ directory to modules/ to re-organise module structure (#567) 2021-07-07 10:10:18 +01:00